https://sourceforge.net/p/mutationmapper/activity/Recent activity for Mutation MapperenMon, 17 Aug 2015 10:20:02 -0000https://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.2/readme.md/downloadMutation MapperMon, 17 Aug 2015 10:20:02 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.2/readme.md/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.2/MutationMapper-2.2-1-x86_64.pkg.tar/downloadMutation MapperMon, 17 Aug 2015 10:15:03 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.2/MutationMapper-2.2-1-x86_64.pkg.tar/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.2/MutationMapper-Linux64-2.2.deb/downloadMutation MapperMon, 17 Aug 2015 10:15:03 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.2/MutationMapper-Linux64-2.2.deb/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.2/MutationMapper-MacOSX-2.2.dmg/downloadMutation MapperMon, 17 Aug 2015 10:15:03 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.2/MutationMapper-MacOSX-2.2.dmg/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.2/MutationMapper_v2.2_jar.zip/downloadMutation MapperMon, 17 Aug 2015 10:15:03 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.2/MutationMapper_v2.2_jar.zip/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.2/MutationMapper-2.2-windows-installer.exe/downloadMutation MapperMon, 17 Aug 2015 10:15:03 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.2/MutationMapper-2.2-windows-installer.exe/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.2/MutationMapper-2.2-1.x86_64.rpm/downloadMutation MapperMon, 17 Aug 2015 10:15:03 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.2/MutationMapper-2.2-1.x86_64.rpm/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.2/MutationMapper-2.2-1-x86_64_ArchLinux_x64.tar.gz/downloadMutation MapperMon, 17 Aug 2015 10:15:03 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.2/MutationMapper-2.2-1-x86_64_ArchLinux_x64.tar.gz/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.1/README.md/downloadMutation MapperSat, 23 May 2015 00:19:03 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.1/README.md/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.1/MutationMapper-2.1-windows-installer.exe/downloadMutation MapperFri, 22 May 2015 22:57:04 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.1/MutationMapper-2.1-windows-installer.exe/downloadhttps://sourceforge.net/p/mutationmapper/code/ci/a0af8d3016271b2168bb999ee6497eb01c8b47e3/correct the title of the about windowDavid ParryFri, 22 May 2015 12:32:29 -0000https://sourceforge.net/p/mutationmapper/code/ci/a0af8d3016271b2168bb999ee6497eb01c8b47e3/https://sourceforge.net/p/mutationmapper/code/ci/8c4ee98224681094c93fffa2199eaccc7cdee192/update linux package filesDavid ParryThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/8c4ee98224681094c93fffa2199eaccc7cdee192/https://sourceforge.net/p/mutationmapper/code/ci/0faef1973d094282acdb631a32f7db18230aea65/Update README.mdDavid A. ParryThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/0faef1973d094282acdb631a32f7db18230aea65/https://sourceforge.net/p/mutationmapper/code/ci/d1d85187f22e2945c5d923b9d7b3d43e646bf254/support flybase gene/transcript IDsDavid ParryThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/d1d85187f22e2945c5d923b9d7b3d43e646bf254/https://sourceforge.net/p/mutationmapper/code/ci/fc07fff12aaa0a7fb6fdb9b7b5ac7339b044d903/add functional help and about menus to result v...DavidThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/fc07fff12aaa0a7fb6fdb9b7b5ac7339b044d903/https://sourceforge.net/p/mutationmapper/code/ci/62a5b321b582a9ac0ffdd81be2dfe04f0f4bbb4e/get scientific names when retrieving species na...David ParryThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/62a5b321b582a9ac0ffdd81be2dfe04f0f4bbb4e/https://sourceforge.net/p/mutationmapper/code/ci/84b30c5f87e0867c6fe27cfe0f2a3f6470742718/support zebra finch species. Support yeast IDs ...David ParryThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/84b30c5f87e0867c6fe27cfe0f2a3f6470742718/https://sourceforge.net/p/mutationmapper/code/ci/8413da20f11b80d9e7693ef61a8598678911aa2a/fix for species with spaces in their names (e.g...DaveThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/8413da20f11b80d9e7693ef61a8598678911aa2a/https://sourceforge.net/p/mutationmapper/code/ci/a41925db81a54b0dce63619c170f72443a8b8b83/adjust protein consequence column widthDavid ParryThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/a41925db81a54b0dce63619c170f72443a8b8b83/https://sourceforge.net/p/mutationmapper/code/ci/4c4b76a6255103a51765bc1b339e6513b2538b49/update version number on package filesDavid ParryThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/4c4b76a6255103a51765bc1b339e6513b2538b49/https://sourceforge.net/p/mutationmapper/code/ci/b83bfb2dc7b39e20c098cc21461fe6d6e2de12c6/remove redundant importsDavid ParryThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/b83bfb2dc7b39e20c098cc21461fe6d6e2de12c6/https://sourceforge.net/p/mutationmapper/code/ci/883f30d5719b28e8e2ef662ef1b801f1d9748e98/move SpeciesComparator to its own classDavid ParryThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/883f30d5719b28e8e2ef662ef1b801f1d9748e98/https://sourceforge.net/p/mutationmapper/code/ci/d078d93a55810acdfea29d05055ef86825462d50/support wormbase gene IDsDavid ParryThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/d078d93a55810acdfea29d05055ef86825462d50/https://sourceforge.net/p/mutationmapper/code/ci/c4ed23bcf2927eca8681186584866da786aaad7e/Merge branch 'master' of https://github.com/gan...David ParryThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/c4ed23bcf2927eca8681186584866da786aaad7e/https://sourceforge.net/p/mutationmapper/code/ci/ffff4436e2e62b82aa13b2f45b7636caa1208761/warn about inability to search C. elegans trans...David ParryThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/ffff4436e2e62b82aa13b2f45b7636caa1208761/https://sourceforge.net/p/mutationmapper/code/ci/1912fca70c4301d1003dce63e824e02a0b3016b5/update version number on build filesDavid ParryThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/1912fca70c4301d1003dce63e824e02a0b3016b5/https://sourceforge.net/p/mutationmapper/code/ci/be7785f046bda38d742c38a0e9194cdbe485f0e2/update URL and md5David ParryThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/be7785f046bda38d742c38a0e9194cdbe485f0e2/https://sourceforge.net/p/mutationmapper/code/ci/9962ddfedab81c7c968e9273b1a3c3ffd81749db/Add windows package filesDavid ParryThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/9962ddfedab81c7c968e9273b1a3c3ffd81749db/https://sourceforge.net/p/mutationmapper/code/ci/90627b1d0814a0db5d304cfd88637f8fd9e3d24b/Make link text wrap and change colorDavid ParryThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/90627b1d0814a0db5d304cfd88637f8fd9e3d24b/https://sourceforge.net/p/mutationmapper/code/ci/a75fa52015658d9382b47e0b1c3d7df92d18094e/add functional help and about menus to result v...DavidThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/a75fa52015658d9382b47e0b1c3d7df92d18094e/https://sourceforge.net/p/mutationmapper/code/ci/2a8e9781bba2b6b21dc68a37ee59f254729f1e57/get text from hyperlink when copyingDavid ParryThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/2a8e9781bba2b6b21dc68a37ee59f254729f1e57/https://sourceforge.net/p/mutationmapper/code/ci/d6c1a9724207a23137006519bd6f5704265e9889/allow keyboard navigation of species choiceboxDavid ParryThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/d6c1a9724207a23137006519bd6f5704265e9889/https://sourceforge.net/p/mutationmapper/code/ci/75eb7654103dd2559c9cdebf7fc11a498f33c9f9/update version numberDavid ParryThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/75eb7654103dd2559c9cdebf7fc11a498f33c9f9/https://sourceforge.net/p/mutationmapper/code/ci/d9459179abb632351213b0b7e90d5971cc56fe0d/Add windows build scriptDavidThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/d9459179abb632351213b0b7e90d5971cc56fe0d/https://sourceforge.net/p/mutationmapper/code/ci/c5a7089c3f4ca2fea9ab15b4d9acbaf63cc2f259/add @Override annotationDavid ParryThu, 21 May 2015 23:22:27 -0000https://sourceforge.net/p/mutationmapper/code/ci/c5a7089c3f4ca2fea9ab15b4d9acbaf63cc2f259/https://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.1/MutationMapper_v2.1_jar.zip/downloadMutation MapperThu, 21 May 2015 23:18:02 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.1/MutationMapper_v2.1_jar.zip/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.1/MutationMapper-Linux64-2.1.deb/downloadMutation MapperThu, 21 May 2015 23:11:03 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.1/MutationMapper-Linux64-2.1.deb/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.1/MutationMapper-2.1-windows-installer.exe/downloadMutation MapperThu, 21 May 2015 23:11:03 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.1/MutationMapper-2.1-windows-installer.exe/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.1/README.md/downloadMutation MapperThu, 21 May 2015 23:11:03 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.1/README.md/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.1/MutationMapper-MacOSX-2.1.dmg/downloadMutation MapperThu, 21 May 2015 23:10:04 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.1/MutationMapper-MacOSX-2.1.dmg/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.1/MutationMapper-2.1-1-x86_64.pkg.tar.xz/downloadMutation MapperThu, 21 May 2015 23:10:04 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.1/MutationMapper-2.1-1-x86_64.pkg.tar.xz/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.1/MutationMapper-Linux64-2.1-1.x86_64.rpm/downloadMutation MapperThu, 21 May 2015 23:10:04 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.1/MutationMapper-Linux64-2.1-1.x86_64.rpm/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/README.md/downloadMutation MapperTue, 12 May 2015 22:59:03 -0000http://sourceforge.net/projects/mutationmapper/files/README.md/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.0/MutationMapper-MacOSX-2.0.dmg/downloadMutation MapperTue, 12 May 2015 22:53:03 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.0/MutationMapper-MacOSX-2.0.dmg/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.0/MutationMapper-2.0-windows-installer.exe/downloadMutation MapperTue, 12 May 2015 22:53:03 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.0/MutationMapper-2.0-windows-installer.exe/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.0/MutationMapper-2.0-1-x86_64.pkg.tar.xz/downloadMutation MapperTue, 12 May 2015 22:53:03 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.0/MutationMapper-2.0-1-x86_64.pkg.tar.xz/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.0/MutationMapper-Linux64-2.0.deb/downloadMutation MapperTue, 12 May 2015 22:53:03 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.0/MutationMapper-Linux64-2.0.deb/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/mutationmapper/files/version%25202.0/README.md/downloadMutation MapperTue, 12 May 2015 22:52:03 -0000http://sourceforge.net/projects/mutationmapper/files/version%202.0/README.md/downloadhttps://sourceforge.net/p/mutationmapper/code/ci/a5f509538a595129f193df1304a295d822c54783/include mention of intronic coordinates and add...DaveTue, 12 May 2015 14:02:18 -0000https://sourceforge.net/p/mutationmapper/code/ci/a5f509538a595129f193df1304a295d822c54783/https://sourceforge.net/p/mutationmapper/code/ci/d5439eaabadb09dcf164f282f9f94ac2ca7dde16/add linux package filesDavid ParryTue, 12 May 2015 14:02:18 -0000https://sourceforge.net/p/mutationmapper/code/ci/d5439eaabadb09dcf164f282f9f94ac2ca7dde16/https://sourceforge.net/p/mutationmapper/code/ci/66cba92787e844890686d8d48c1085848b4babf4/Create README.mdDavid A. ParryTue, 12 May 2015 14:02:18 -0000https://sourceforge.net/p/mutationmapper/code/ci/66cba92787e844890686d8d48c1085848b4babf4/https://sourceforge.net/p/mutationmapper/code/ci/d08a111f022d164d51b7c63d7e586ac74f65e323/add copywrite headerDavid ParryTue, 12 May 2015 14:02:18 -0000https://sourceforge.net/p/mutationmapper/code/ci/d08a111f022d164d51b7c63d7e586ac74f65e323/https://sourceforge.net/p/mutationmapper/code/ci/30bbc8644743e643fd93acd410137def195fdb9e/make default buttonDavid ParryTue, 12 May 2015 14:02:18 -0000https://sourceforge.net/p/mutationmapper/code/ci/30bbc8644743e643fd93acd410137def195fdb9e/https://sourceforge.net/p/mutationmapper/code/ci/3be1bd794e7b492fc9d69501396ab129d59cd9c9/add note about GRCh37David ParryTue, 12 May 2015 14:02:18 -0000https://sourceforge.net/p/mutationmapper/code/ci/3be1bd794e7b492fc9d69501396ab129d59cd9c9/https://sourceforge.net/p/mutationmapper/code/ci/d8d96848f74b122a1e8987f68ca5da8c55b58350/remove beta iconDavid ParryTue, 12 May 2015 14:02:18 -0000https://sourceforge.net/p/mutationmapper/code/ci/d8d96848f74b122a1e8987f68ca5da8c55b58350/https://sourceforge.net/p/mutationmapper/code/ci/1a47266170f8963a1d7ae0fa37e48d4ad856d681/remove redundant importDavid ParryTue, 12 May 2015 14:02:18 -0000https://sourceforge.net/p/mutationmapper/code/ci/1a47266170f8963a1d7ae0fa37e48d4ad856d681/https://sourceforge.net/p/mutationmapper/code/ci/c3f99a98260d9998c08fa18e4076c3b52f97ab89/more detailed error when seq matches multiple t...DaveTue, 12 May 2015 14:02:18 -0000https://sourceforge.net/p/mutationmapper/code/ci/c3f99a98260d9998c08fa18e4076c3b52f97ab89/https://sourceforge.net/p/mutationmapper/code/ci/448092565c5f01e0e747ac508a755451c60c17b2/update build scriptsDavid ParryTue, 12 May 2015 14:02:18 -0000https://sourceforge.net/p/mutationmapper/code/ci/448092565c5f01e0e747ac508a755451c60c17b2/https://sourceforge.net/p/mutationmapper/code/ci/7ab9604cea7c11368e1256d1beffd254bdf108dc/add getRefSeqIds method. Add canonical info as ...DaveMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/7ab9604cea7c11368e1256d1beffd254bdf108dc/https://sourceforge.net/p/mutationmapper/code/ci/737819b6c755fbd9c5511b7e82f108d4b2298a6c/add mac iconDaveMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/737819b6c755fbd9c5511b7e82f108d4b2298a6c/https://sourceforge.net/p/mutationmapper/code/ci/5fd51b5db6abd1dcaaa7b052726aaaca7a11d4c2/add result display error dialogDavid A. ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/5fd51b5db6abd1dcaaa7b052726aaaca7a11d4c2/https://sourceforge.net/p/mutationmapper/code/ci/da2abc7005921014d35dd8b81971ed7d77d3bdb5/add option to use GRCh37 server for humanDavid A. ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/da2abc7005921014d35dd8b81971ed7d77d3bdb5/https://sourceforge.net/p/mutationmapper/code/ci/9212787cfb4110436cf0512a48ace167e8afa606/add show results table menu itemDavid ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/9212787cfb4110436cf0512a48ace167e8afa606/https://sourceforge.net/p/mutationmapper/code/ci/c45de04d6ca33a79ae64b065017e061ee4501d6e/return hashmaps of coordinate informationDavid A. ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/c45de04d6ca33a79ae64b065017e061ee4501d6e/https://sourceforge.net/p/mutationmapper/code/ci/48e3291ae397f540f62538d776342d0792f9b28d/remove unwieldy constructors, add some setters ...DaveMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/48e3291ae397f540f62538d776342d0792f9b28d/https://sourceforge.net/p/mutationmapper/code/ci/1d423e21dbd375c2c449e0e9e00b7e2ee50f6134/add canonical/coding/refseq transcript menu itemsDavid A. ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/1d423e21dbd375c2c449e0e9e00b7e2ee50f6134/https://sourceforge.net/p/mutationmapper/code/ci/04fff190c00d19f4046dab10fed1e25258776600/correct getLength functionDavid ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/04fff190c00d19f4046dab10fed1e25258776600/https://sourceforge.net/p/mutationmapper/code/ci/df68982839214ba2038cc7c65428adfa7b130930/add clear previous result menu item and methodDavid ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/df68982839214ba2038cc7c65428adfa7b130930/https://sourceforge.net/p/mutationmapper/code/ci/0006d5156f5f9e48384150eceb588de9f92f2b0a/check gene symbols really match IDsDavid ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/0006d5156f5f9e48384150eceb588de9f92f2b0a/https://sourceforge.net/p/mutationmapper/code/ci/39154ba336313f30ced7344800ef60dbb6335638/change sizes and text wrappingDaveMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/39154ba336313f30ced7344800ef60dbb6335638/https://sourceforge.net/p/mutationmapper/code/ci/b8441afebea1e8615dbd972a0ba1168330bbc87c/prototype resultsDavid A. ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/b8441afebea1e8615dbd972a0ba1168330bbc87c/https://sourceforge.net/p/mutationmapper/code/ci/465302ec9cb2cb12c7d2c3027eab8904162e3cea/move mapperTask implementation to codingToGenom...DaveMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/465302ec9cb2cb12c7d2c3027eab8904162e3cea/https://sourceforge.net/p/mutationmapper/code/ci/798e4432f8bd27848eb6eb4a7abbbd32faf63faa/more columns and width adjustmentsDaveMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/798e4432f8bd27848eb6eb4a7abbbd32faf63faa/https://sourceforge.net/p/mutationmapper/code/ci/7a3e513a300efd0ad6b37ae03217e567efaeda5e/add quite menu itemDavid ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/7a3e513a300efd0ad6b37ae03217e567efaeda5e/https://sourceforge.net/p/mutationmapper/code/ci/cb185d77e6f26a34829ccc056f0dc3eb7d43a481/set chromsome names for transcriptsDavid ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/cb185d77e6f26a34829ccc056f0dc3eb7d43a481/https://sourceforge.net/p/mutationmapper/code/ci/5b74be502eb7663c092bef6a892c98bfd356b100/store cds coordinate info as a stringDavid ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/5b74be502eb7663c092bef6a892c98bfd356b100/https://sourceforge.net/p/mutationmapper/code/ci/280cd68f90f6a7b89b3ba655b8d0cbe8379b80d7/fix cds and protein consequence columns, adjust...David ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/280cd68f90f6a7b89b3ba655b8d0cbe8379b80d7/https://sourceforge.net/p/mutationmapper/code/ci/0761b8b6df2f5ee9d96a9819ee1e7be43b75b8e4/change run button size (hopefully to fit cancel...DaveMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/0761b8b6df2f5ee9d96a9819ee1e7be43b75b8e4/https://sourceforge.net/p/mutationmapper/code/ci/8935b949bdc7d717d506c82e16961c7745a68331/reset index when clearing previous resultsDavid ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/8935b949bdc7d717d506c82e16961c7745a68331/https://sourceforge.net/p/mutationmapper/code/ci/39b00d2b3148ffb84dd4854e6a93b53d5e654afb/use HashMaps and ArrayLists for consequences sp...David A. ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/39b00d2b3148ffb84dd4854e6a93b53d5e654afb/https://sourceforge.net/p/mutationmapper/code/ci/20dd9e5278c410d4521e51e066d5cf3ba4557a3e/retrieve species from REST. Add rudimentary cod...David A. ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/20dd9e5278c410d4521e51e066d5cf3ba4557a3e/https://sourceforge.net/p/mutationmapper/code/ci/a412794cf6daf76421683dbd1dfe2b2c45c16357/finish getGeneDetails implementationDavid A. ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/a412794cf6daf76421683dbd1dfe2b2c45c16357/https://sourceforge.net/p/mutationmapper/code/ci/81f9e9582f4e5fa0c73f8858b9e6007351fcd90a/remove rogue columnDavid ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/81f9e9582f4e5fa0c73f8858b9e6007351fcd90a/https://sourceforge.net/p/mutationmapper/code/ci/c6b81444ba22a0d6eb692395bac3e594e53bed79/add exon/intron column and options menuDaveMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/c6b81444ba22a0d6eb692395bac3e594e53bed79/https://sourceforge.net/p/mutationmapper/code/ci/c5b0e978c401bf9ee483a1fd5ffe99c22eac6700/put more of the sequenceToCoordinates logic wit...David ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/c5b0e978c401bf9ee483a1fd5ffe99c22eac6700/https://sourceforge.net/p/mutationmapper/code/ci/2a1b6bb33a8a09509828b542233c2abddca48caa/add style sheet (mainly to allow hiding of prog...David ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/2a1b6bb33a8a09509828b542233c2abddca48caa/https://sourceforge.net/p/mutationmapper/code/ci/38a82cecacd460ab8c1e92f549aa6c2861559d12/fix imports, update TO DOs!DaveMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/38a82cecacd460ab8c1e92f549aa6c2861559d12/https://sourceforge.net/p/mutationmapper/code/ci/eb60bb121fb1bf8c38e29ce66985c29016db9209/get polyphen scores, sift scores, SNP info and ...DaveMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/eb60bb121fb1bf8c38e29ce66985c29016db9209/https://sourceforge.net/p/mutationmapper/code/ci/09135b0cad68d79dbee0705ef5271cfd31218a6b/bind options menus and display transcript resul...DaveMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/09135b0cad68d79dbee0705ef5271cfd31218a6b/https://sourceforge.net/p/mutationmapper/code/ci/9ba528d6f489c6e63f3347b48fd72d6cfeacb7c5/complain if user has not entered required infoDavid ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/9ba528d6f489c6e63f3347b48fd72d6cfeacb7c5/https://sourceforge.net/p/mutationmapper/code/ci/0c99572c8baf6ac8e8db51d8766e343aca67b1c7/Add EnsemblRest class for REST API functionsDavid A. ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/0c99572c8baf6ac8e8db51d8766e343aca67b1c7/https://sourceforge.net/p/mutationmapper/code/ci/99b9d9033cddd7b2a3b394eda4f10a726459cd37/make menu non-focus-traversableDaveMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/99b9d9033cddd7b2a3b394eda4f10a726459cd37/https://sourceforge.net/p/mutationmapper/code/ci/ea3d042987c21b0d2aeaa0113e868b06a9d4dc5e/converte GeneDetails class into a summarry clas...David ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/ea3d042987c21b0d2aeaa0113e868b06a9d4dc5e/https://sourceforge.net/p/mutationmapper/code/ci/ba30844429811ba518cebf98a6b4d57ae310ccb9/create hyperlinks for genes/transcripts/snpsDavid ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/ba30844429811ba518cebf98a6b4d57ae310ccb9/https://sourceforge.net/p/mutationmapper/code/ci/371671a2c7a564f98c41b6375d6cf514e6314937/convert genomic coordinate to string in HashMapDavid A. ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/371671a2c7a564f98c41b6375d6cf514e6314937/https://sourceforge.net/p/mutationmapper/code/ci/e846da8a353ce55f2a534bbf0ff912878a4c1c6d/add MutationMapperResultClassDavid A. ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/e846da8a353ce55f2a534bbf0ff912878a4c1c6d/https://sourceforge.net/p/mutationmapper/code/ci/4055e4cc70dc1f3ecae41cfbddcbe615d4227816/add json smar jarDavid ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/4055e4cc70dc1f3ecae41cfbddcbe615d4227816/https://sourceforge.net/p/mutationmapper/code/ci/64715cdba36f9105e1cc768f4f0db312bdfd84a5/lib/json-smart-1.3.1.jarDavid A. ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/64715cdba36f9105e1cc768f4f0db312bdfd84a5/https://sourceforge.net/p/mutationmapper/code/ci/cb147d7c3ac5dd22bb94d600395078c1f63897d2/add getTranscriptSequences method. Correct cast...David ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/cb147d7c3ac5dd22bb94d600395078c1f63897d2/https://sourceforge.net/p/mutationmapper/code/ci/8a50f485816d11802e168157ded5e3fe750e639d/make showResultsMenuItem bring table to front i...David ParryMon, 11 May 2015 21:50:26 -0000https://sourceforge.net/p/mutationmapper/code/ci/8a50f485816d11802e168157ded5e3fe750e639d/