Open Source Java Data Visualization Software - Page 3

Remotely Inventory and Poll UNIX servers in seconds. (without installing extra software on your servers, just by SSH communication plain old UNIX commands).https://sites.google.com/site/ronuitzaandam/ Your entire datacenter can be automatically inventoried by supplying hostname, username & password for each server, either “one by one” or via an automated CSV host-list import file. This software goes great with other UNIX software like WinSCP and Putty etc !!!

A small Java program for reading, analysing, viewing and animating the data from an EEG machine during a psychology experiment.

GMOL is an application designed to visualize genome structure in 3D. It allows users to view the genome structure at multiple scales, including: global, chromosome, loci, fiber, nucleosome, and nucleotide. This software was built upon the pre-existing Jmol package by Prof. Cheng's group. The software is developed in Prof. Jianlin Cheng's Bioinformatics, Data Mining and Machine Learning Laboratory in the Computer Science Department at the University of Missouri - Columbia, USA. The project is supported by the National Science Foundation (grant no. DBI1149224). If you use GMOL in your research, please cite: Nowotny, Jackson, Avery Wells, Oluwatosin Oluwadare, Lingfei Xu, Renzhi Cao, Tuan Trieu, Chenfeng He, and Jianlin Cheng. "GMOL: an interactive tool for 3D genome structure visualization." Scientific reports 6 (2016): 20802.

TabuVis is a comprehensive visual analysis tool that provides a flexible, customizable and interactive visualization for tabular (or multidimensional) data. It utilizes scatter-plot visualization approach to provide comprehensive and interactive views for different attribute mappings. It provides single scatter-plot and multiple scatter-plots together with Map (GIS) capability. The project is available at: http://staff.scem.uws.edu.au/~vinh/projects/TabuVis/ Related publications: https://www.sciencedirect.com/science/article/pii/S2468502X20300358 https://dl.acm.org/doi/pdf/10.1145/2968220.2968248 https://link.springer.com/content/pdf/10.1007/s11432-013-4870-1.pdf https://dl.acm.org/doi/pdf/10.1145/2397696.2397705

This Java application serves to transform W3C XML Schema instances into interactive diagrams in SVG format. The diagram represents structure of XML files and provides information about individual items – elements and attributes.

Software tools for building interactive information visualization applications. Prefuse supports a rich set of features for data modeling, visualization, animation, and interaction for both Java (prefuse) and Flash (prefuse flare).

Avenzoar is a one-year exploration of renal cell carcinoma morphology and its related single nucleotide polymorphisms (SNPa) as a method of automating diagnosis of cancer by using a computer-aided decision tree controlled by analytical statistics.

Fiji is an image processing package based on ImageJ.

Karto allows to calibrate a scanned map (or aerial photos) with some known geo-points (Lambert, UTM, ...). After that, you can add any points (GPS points) in the map to build your own map. You can also add a transparent GIF image in the map after calibration (cave, mines, roads, ...). You can realize your own cartes with the data you add inside adding/showing/hiding layers of data. You can import/export your data files (after checking and correcting them) in differents formats.

jCharts is a 100% Java based charting utility that outputs a variety of charts. This package is ideal for displaying charts via Servlets.

Application sharing software that allows individual windows to be replicated to other computers. Remote collaboration tool based on a modified VNC protocol. Its advantage is to keep some things, like email, private, while sharing other desktop apps.

VANTED - Visualization and Analysis of NeTworks containing Experimental Data At SourceForge the VANTED development history is preserved, only limited amount of development will proceed here. Please head on to the most recent developments, which can be observed at www.vanted.org.

Dexter is a little java program to interactively or semi-automatically extract data from scanned graphs. In its applet incarnation it is used by the Astrophysics Data System. A rudimenary standalone version is provided as well.

Gavrog stands for "Generation, Analysis and Visualization of Reticular Ornaments using Gavrog". It is a Java library together with a suite of interactive applications for the study of periodic net-like structures in space and their applications.

JPlotter is an open source math plotter that can draw graphs of arbitrary mathematical functions. Some of the special features are plotting of the derivatives, area calculation, plotting of directional fields of differential equations and plotting of phase and amplitude graph of complex functions.

Visual Turing Machine is a tool for visually designing Turing machines. This means no coding in abstract scripting languages, but simple point&click design. It uses the a..z symbol set, plus the "empty" # symbol, and also simulates an infinite tape.

This project is a “proof-of-concept” prototype that used diagrammatic visualization for presenting multi-dimensional port data, in relation to local and global events. The visualization emphasizes relations between land-side and wharf-side elements and thus conveys derivable knowledge on labor productivity and efficiency. It can be used to convey commodity flows through the port and state, modes of transport, facilities and their capacities, operational characteristics, intermodal operations, and parameters required for calculating system efficiency, benefits and costs.

Netsim is a mobile ad hoc network simulator targeted at large heterogeneous node configurations. It is written in Java and is easily extensible through its modular concept.

An open source workbench for chemo- and bioinformatics built on the Eclipse Rich Client Platform (RCP).

Optical Design Software for optical systems comprised of light sources, lenses, apertures, prisms, imagers, photometers, etc. Simulate light through the system and compute images and intensities at various locations in the design.

MindRaider is a personal notebook and outliner. Where do you keep private remarks like ideas, plans, gift tips and howtos? Loads of documents and remarks spread around the file system? Can you find a remark when you need it? No? Try MindRaider!

CartoReso intends to facilitate enterprise computer network mapping.

LAMINA (Leaf shApe deterMINAtion) is a tool to provide classical measures of leaf shape (blade dimensions) and size (area) as well as measures that indicate asymmetry in leaf shape and measures of herbivory damage (missing leaf area).

SciPlore MindMapping is based on FreeMind but extended with features for students & researchers. It integrates mind maps with reference and pdf management (BibTeX support & PDF Bookmark import). Keywords: Mind maps, Mind Mapping, MindMap, JabRef

TouchGraph provides a set of interfaces for graph visualization using force-based layout and focus+context techniques. For now only older code is available, but we are planning to release new versions as well.